Nhan Tran
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Nhan Tran
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PSIO 404 Exam I

Question 1 of 14

1

Which of the following is a covalent post-translational modification of signal proteins which is also ATP-independent?

Select one of the following:

  • Phosphorylation

  • GTP Hydrolysis

  • Nitrosylation

  • Oxidation

Explanation

Question 2 of 14

1

Which of the reactive oxygen species (ROS) is the most dangerous to cells?

Select one of the following:

  • Hydrogen peroxide (H2O2)

  • Superoxide anion radical (O2*-)

  • Hydroxyl radical (OH*)

Explanation

Question 3 of 14

1

When a signaling protein hydrolyzes a nucleotide triphosphate, order is produced. The resulting order is reflected in the formation of more protein-protein interactions.

Select one of the following:

  • True
  • False

Explanation

Question 4 of 14

1

For a generic switching reaction, which of the following statements is the most correct?

Select one of the following:

  • Switching a signal-processing protein "ON" always requires energy.

  • Switching a signal-processing protein "ON" or "OFF" requires energy, but only one direction for the switch must be linked to an energy-supplying reaction.

  • Switching a signal-processing protein "OFF" always requires energy.

  • Switching a signal-processing protein "ON" always requires energy, and switching a signal-processing protein "OFF" also always requires energy.

Explanation

Question 5 of 14

1

Which of the following terms refers to the way in which the binding of signal molecules alter conformation equilibrium for signal-processing proteins?

Select one of the following:

  • allostery

  • scaffolding

  • covalent interaction

  • adaptation

Explanation

Question 6 of 14

1

Which of the following is not a strategy for maintaining and improving stability in a signal-processing system?

Select one of the following:

  • noise filtering

  • redundancy

  • encoding

  • pattern generation

  • adaptation

Explanation

Question 7 of 14

1

Which of the following types of proteins acts to vastly speed up signal transduction by pre-assembling signaling proteins into a signaling complex?

Select one of the following:

  • noise-filtering proteins

  • proteins with one or more isoforms (alternatively-spliced proteins)

  • adaptor proteins

  • scaffold (scaffolding) proteins

Explanation

Question 8 of 14

1

Which statement is false?

Select one of the following:

  • The data-processing protein network ("brain") of a cell takes advantage of the modular design of proteins to link specific outputs to specific inputs.

  • The data-processing protein network ("brain") of a cell employs at least 4 mechanisms to maintain and improve stability.

  • The data-processing protein network ("brain") of a cell controls the availability and non-availability of interaction domains to govern how a signal is processed

  • The data-processing protein network ("brain") of a cell uses proteins as switching elements.

  • The data-processing protein network ("brain") of a cell rarely links short-range and long-range signaling during signal transduction.

Explanation

Question 9 of 14

1

Which family of proteins acts as unfoldases to dissociate protein-protein and protein-nucleic acid complexes?

Select one of the following:

  • the large (trimeric) G-protein family

  • the small G-protein family

  • the chaperone family

  • the AAA+ protein family

Explanation

Question 10 of 14

1

Chaperone proteins such as heat shock protein 90 (Hsp90) use the energy of _____ hydrolysis to enable misfolded steroid hormone receptors to go from native state (stable but non-functional state) to functional state.

Select one of the following:

  • ATP

  • glutathione

  • phosphoenol pyruvate (PEP)

  • GTP

Explanation

Question 11 of 14

1

For the phosphorylation switch, which of the following amino acids is not a common target of phosphorylation?

Select one of the following:

  • threonine (Thr)

  • lysine (Lys)

  • serine (Ser)

  • tyrosine (Tyr)

Explanation

Question 12 of 14

1

Which of the major subfamilies of protein kinases includes protein kinases that are activated by cAMP and cGMP?

Select one of the following:

  • the CMGC kinases

  • the Ste11 family

  • the AGC family

  • the Ca2+/calmodulin-dependent kinases

Explanation

Question 13 of 14

1

Which of the major subfamilies of protein kinases includes protein kinases that phosphorylate Ser and Thr amino acids in the neighborhood of Pro residues?

Select one of the following:

  • the CMGC kinases

  • the Ste11 family

  • the AGC family

  • the Ca2+/calmodulin-dependent kinases

Explanation

Question 14 of 14

1

Which of the major subfamilies of protein kinases includes mainly protein kinases that are constituents of MAP kinase modules?

Select one of the following:

  • the Ste11 family

  • the AGC family

  • the CMGC kinases

  • the Ca2+/calmodulin-dependent kinases

Explanation